Abstract

SIERRA MEJIA, Andrea; GALLO GARCIA, Yuliana; GUTIERREZ SANCHEZ, Pablo Andrés  and  MARIN MONTOYA, Mauricio Alejandro. Design of primers for specific detection of Potato Virus Y (PVY) by RT-PCR. Acta biol.Colomb. [online]. 2019, vol.24, n.3, pp.561-565. ISSN 0120-548X.  https://doi.org/10.15446/abc.v24n3.76523.

Potato virus Y (PVY) is one of the most limiting viruses in the production of potato (Solanum tuberosum and S. phureja) worldwide. This virus is transmitted by aphids and infected tuber-seeds, and for this reason, disease management of PVY requires, among others, using certified planting material through highly sensitive techniques such as ELISA and RT-PCR. However, RT-PCR-based methods require primers of high specificity to allow the unequivocal detection of viruses in asymptomatic tissues. In this work, we report a new set of primers (PVY_Col) for detection of PVY by RT-PCR and real-time RT-PCR (RT-qPCR). These primers were designed using sequences of PVY isolates from Colombia and the rest of the world. An essential feature of these primers is their specificity, since they don't amplify templates from Potato virus V (PVV), a close PVY relative that also infects potato crops in Colombia. It is expected that the PVY_Col primer set will be useful to support potato seed certification programs, epidemiological studies, and PVY disease management programs.

Keywords : Molecular detection; Potato; Potyvirus; Sequencing; Solanaceae.

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